PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_39702
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 57aa    MW: 6589.66 Da    PI: 12.1689
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_39702genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-18150355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr ++ +g+++AeIr p+ +g   r++lg+f+ta +Aa+a++ a+ +++g
  PEQU_39702  1 YRGVRKRP-WGKFAAEIRNPKRRG--SRIWLGTFDTAVQAARAYDCAAFRMRG 50
                9*******.**********96554..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.63E-23157No hitNo description
PfamPF008475.1E-14150IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.0E-31157IPR001471AP2/ERF domain
PROSITE profilePS5103223.775157IPR001471AP2/ERF domain
SuperFamilySSF541714.84E-22157IPR016177DNA-binding domain
PRINTSPR003672.4E-11112IPR001471AP2/ERF domain
SMARTSM003802.5E-27157IPR001471AP2/ERF domain
PRINTSPR003672.4E-112440IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 57 aa     Download sequence    Send to blast
YRGVRKRPWG KFAAEIRNPK RRGSRIWLGT FDTAVQAARA YDCAAFRMRG SKAILNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-26157662ATERF1
3gcc_A2e-26157662ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014512064.13e-31PREDICTED: ethylene-responsive transcription factor ERF105
SwissprotO803415e-32EF102_ARATH; Ethylene-responsive transcription factor 5
TrEMBLA0A0L9TV102e-31A0A0L9TV10_PHAAN; Uncharacterized protein
STRINGPOPTR_0001s11800.11e-30(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-33ethylene responsive element binding factor 5